PD Dr. Athina Zouni - Publications

2433 Investigating the Structure and Dynamics of Apo‐Photosystem II R. Han, K. Rempfer, M. Zhang, H. Dobbek, A. Zouni, H. Dau, S. Luber ChemCatChem 2019, 16, 4072–4080, 10.1002/cctc.201900351

2371 Structures of the intermediates of Kok’s photosynthetic water oxidation clock J. Kern, R. Chatterjee, I. D. Young, F. D. Fuller, L. Lassalle, M. Ibrahim, S. Gul, T. Fransson, A. S. Brewster, R. Alonso-Mori, R. Hussein, M. Zhang, L. Douthit, C. de Lichtenberg, M. H. Cheah, D. Shevela, J. Wersig, I. Seuffert, D. Sokaras, E. Pastor, C. Weninger, T. Kroll, R. G. Sierra, P. Aller, A. Butryn, A. M. Orville, M. Liang, A. Batyuk, J. E. Koglin, S. Carbajo, S. Boutet, N. W. Moriarty, J. M. Holton, H. Dobbek, P. D. Adams, U. Bergmann, N. K. Sauter, A. Zouni, J. Messinger, J. Yano, V. K. Yachandra Nature 2018, 7731, 421–425, 10.1038/s41586-018-0681-2

2186 Structural insights into the light-driven auto-assembly process of the water-oxidizing Mn4CaO5-cluster in photosystem II M. Zhang, M. Bommer, R. Chatterjee, R. Hussein, J. Yano, H. Dau, J. Kern, H. Dobbek, A. Zouni eLife eLife 2017, 10.7554/eLife.26933

2185 Role of missing carotenoid in reducing the fluorescence of single monomeric photosystem II core complexes S. Skandary, F. Müh, I. Ashraf, M. Ibrahim, M. Metzger, A. Zouni, A. J. Meixner, M. Brecht Physical Chemistry Chemical Physics 2017, 20, 13189–13194, 10.1039/c6cp07748j

2184 Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers F. D. Fuller, S. Gul, R. Chatterjee, E. S. Burgie, I. D. Young, H. Lebrette, V. Srinivas, A. S. Brewster, T. Michels-Clark, J. A. Clinger, B. Andi, M. Ibrahim, E. Pastor, C. de Lichtenberg, R. Hussein, C. J. Pollock, M. Zhang, C. A. Stan, T. Kroll, T. Fransson, C. Weninger, M. Kubin, P. Aller, L. Lassalle, P. Bräuer, M. D. Miller, M. Amin, S. Koroidov, C. G. Roessler, M. Allaire, R. G. Sierra, P. T. Docker, J. M. Glownia, S. Nelson, J. E. Koglin, D. Zhu, M. Chollet, S. Song, H. Lemke, M. Liang, D. Sokaras, R. Alonso-Mori, A. Zouni, J. Messinger, U. Bergmann, A. K. Boal, J. M. Bollinger, C. Krebs, M. Högbom, G. N. Phillips, R. D. Vierstra, N. K. Sauter, A. M. Orville, J. Kern, V. K. Yachandra, J. Yano Nature Methods Nature Methods 2017, 4, 443–449, 10.1038/nmeth.4195

2015 Towards characterization of photo-excited electron transfer and catalysis in natural and artificial systems using XFELs R. Alonso-Mori, K. Asa, U. Bergmann, A. S. Brewster, R. Chatterjee, J. K. Cooper, H. M. Frei, F. D. Fuller, E. Goggins, S. Gul, H. Fukuzawa, D. Iablonskyi, M. Ibrahim, T. Katayama, T. Kroll, Y. Kumagai, B. A. McClure, J. Messinger, K. Motomura, K. Nagaya, T. Nishiyama, C. Saracini, Y. Sato, N. K. Sauter, D. Sokaras, T. Takanashi, T. Togashi, K. Ueda, W. W. Weare, T. C. Weng, M. Yabashi, V. K. Yachandra, I. D. Young, A. Zouni, J. F. Kern, J. Yano Faraday Discussions Faraday Discuss. 2016, 621–638, 10.1039/c6fd00084c

2014 Acoustic Injectors for Drop-On-Demand Serial Femtosecond Crystallography C. G. Roessler, R. Agarwal, M. Allaire, R. Alonso-Mori, B. Andi, J. F. R. Bachega, M. Bommer, A. S. Brewster, M. C. Browne, R. Chatterjee, E. Cho, A. E. Cohen, M. Cowan, S. Datwani, V. L. Davidson, J. Defever, B. Eaton, R. Ellson, Y. Feng, L. P. Ghislain, J. M. Glownia, G. Han, J. Hattne, J. Hellmich, A. Héroux, M. Ibrahim, J. Kern, A. Kuczewski, H. T. Lemke, P. Liu, L. Majlof, W. M. McClintock, S. Myers, S. Nelsen, J. Olechno, A. M. Orville, N. K. Sauter, A. S. Soares, S. M. Soltis, H. Song, R. G. Stearns, R. Tran, Y. Tsai, M. Uervirojnangkoorn, C. M. Wilmot, V. Yachandra, J. Yano, E. T. Yukl, D. Zhu, A. Zouni Structure 2016, 4, 631–640, 10.1016/j.str.2016.02.007

1952 Structure of photosystem II and substrate binding at room temperature I. D. Young, M. Ibrahim, R. Chatterjee, S. Gul, F. D. Fuller, S. Koroidov, A. S. Brewster, R. Tran, R. Alonso-Mori, T. Kroll, T. Michels-Clark, H. Laksmono, R. G. Sierra, C. A. Stan, R. Hussein, M. Zhang, L. Douthit, M. Kubin, C. de Lichtenberg, L. Vo Pham, H. Nilsson, M. H. Cheah, D. Shevela, C. Saracini, M. A. Bean, I. Seuffert, D. Sokaras, T. C. Weng, E. Pastor, C. Weninger, T. Fransson, L. Lassalle, P. Bräuer, P. Aller, P. T. Docker, B. Andi, A. M. Orville, J. M. Glownia, S. Nelson, M. Sikorski, D. Zhu, M. S. Hunter, T. J. Lane, A. Aquila, J. E. Koglin, J. Robinson, M. Liang, S. Boutet, A. Y. Lyubimov, M. Uervirojnangkoorn, N. W. Moriarty, D. Liebschner, P. V. Afonine, D. G. Waterman, G. Evans, P. Wernet, H. Dobbek, W. I. Weis, A. T. Brunger, P. H. Zwart, P. D. Adams, A. Zouni, J. Messinger, U. Bergmann, N. K. Sauter, J. Kern, V. K. Yachandra, J. Yano Nature 2016, 7633, 453–457, 10.1038/nature20161

1775 High-density grids for efficient data collection from multiple crystals E. L. Baxter, L. Aguila, R. Alonso-Mori, C. O. Barnes, C. A. Bonagura, W. Brehmer, A. T. Brunger, G. Calero, T. T. Caradoc-Davies, R. Chatterjee, W. F. Degrado, J. S. Fraser, M. Ibrahim, J. Kern, B. K. Kobilka, A. C. Kruse, K. M. Larsson, H. T. Lemke, A. Y. Lyubimov, A. Manglik, S. E. McPhillips, E. Norgren, S. S. Pang, S. M. Soltis, J. Song, J. Thomaston, Y. Tsai, W. I. Weis, R. A. Woldeyes, V. Yachandra, J. Yano, A. Zouni, A. E. Cohen Acta Crystallographica Section D Structural Biology Acta Crystallographica Section D Structural Biology 2016, 1, 2–11, 10.1107/S2059798315020847

1774 Concentric-flow electrokinetic injector enables serial crystallography of ribosome and photosystem II R. G. Sierra, C. Gati, H. Laksmono, E. H. Dao, S. Gul, F. Fuller, J. Kern, R. Chatterjee, M. Ibrahim, A. S. Brewster, I. D. Young, T. Michels-Clark, A. Aquila, M. Liang, M. S. Hunter, J. E. Koglin, S. Boutet, E. A. Junco, B. Hayes, M. J. Bogan, C. Y. Hampton, E. V. Puglisi, N. K. Sauter, C. A. Stan, A. Zouni, J. Yano, V. K. Yachandra, S. M. Soltis, J. D. Puglisi, H. DeMirci Nature Methods Nature Methods 2015, 1, 59–62, 10.1038/nmeth.3667

1767 Improvements in serial femtosecond crystallography of photosystem II by optimizing crystal uniformity using microseeding procedures M. Ibrahim, R. Chatterjee, J. Hellmich, R. Tran, M. Bommer, V. K. Yachandra, J. Yano, J. Kern, A. Zouni Structural Dynamics Structural Dynamics 2015, 4, 41705– 10.1063/1.4919741

1766 The influence of poly(ethylene glycol) on the micelle formation of alkyl maltosides used in membrane protein crystallization F. Müh, D. DiFiore, A. Zouni Physical Chemistry Chemical Physics Phys. Chem. Chem. Phys. 2015, 17, 11678–11691, 10.1039/C5CP00431D

1765 Variation of Exciton-Vibrational Coupling in Photosystem II Core Complexes from As Revealed by Single-Molecule Spectroscopy S. Skandary, M. Hussels, A. Konrad, T. Renger, F. Müh, M. Bommer, A. Zouni, A. J. Meixner, M. Brecht The Journal of Physical Chemistry B The Journal of Physical Chemistry B 2015, 11, 4203–4210, 10.1021/jp510631x

1442 Native-like Photosystem II Superstructure at 2.44 Å Resolution through Detergent Extraction from the Protein Crystal J. Hellmich, M. Bommer, A. Burkhardt, M. Ibrahim, J. Kern, A. Meents, F. Müh, H. Dobbek, A. Zouni Structure 2014, 11, 1607–1615, 10.1016/j.str.2014.09.007

1441 Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy J. Kern, R. Tran, R. Alonso-Mori, S. Koroidov, N. Echols, J. Hattne, M. Ibrahim, S. Gul, H. Laksmono, R. G. Sierra, R. J. Gildea, G. Han, J. Hellmich, B. Lassalle-Kaiser, R. Chatterjee, A. S. Brewster, C. A. Stan, C. Glöckner, A. Lampe, D. DiFiore, D. Milathianaki, A. R. Fry, M. M. Seibert, J. E. Koglin, E. Gallo, J. Uhlig, D. Sokaras, T. C. Weng, P. H. Zwart, D. E. Skinner, M. J. Bogan, M. Messerschmidt, P. Glatzel, G. J. Williams, S. Boutet, P. D. Adams, A. Zouni, J. Messinger, N. K. Sauter, U. Bergmann, J. Yano, V. K. Yachandra Nature Communications Nature Communications 2014, 1, 10.1038/ncomms5371

1331 Simulations of the polarisation-dependent Raman intensity of -carotene in photosystem II crystals K. Brose, A. Zouni, F. Müh, M. A. Mroginski, J. Maultzsch Chemical Physics 2013, 65–73, 10.1016/j.chemphys.2013.03.016

1329 The nonheme iron in photosystem II F. Müh, A. Zouni Photosynthesis Research Photosynthesis Research 2013, 2, 295–314, 10.1007/s11120-013-9926-y

1328 Structural Changes of the Oxygen-evolving Complex in Photosystem II during the Catalytic Cycle C. Glöckner, J. Kern, M. Broser, A. Zouni, V. Yachandra, J. Yano Journal of Biological Chemistry 2013, 31, 22607–22620, 10.1074/jbc.M113.476622

1327 Simultaneous Femtosecond X-ray Spectroscopy and Diffraction of Photosystem II at Room Temperature J. Kern, R. Alonso-Mori, R. Tran, J. Hattne, R. J. Gildea, N. Echols, C. Glockner, J. Hellmich, H. Laksmono, R. G. Sierra, B. Lassalle-Kaiser, S. Koroidov, A. Lampe, G. Han, S. Gul, D. DiFiore, D. Milathianaki, A. R. Fry, A. Miahnahri, D. W. Schafer, M. Messerschmidt, M. M. Seibert, J. E. Koglin, D. Sokaras, T. C. Weng, J. Sellberg, M. J. Latimer, R. W. Grosse-Kunstleve, P. H. Zwart, W. E. White, P. Glatzel, P. D. Adams, M. J. Bogan, G. J. Williams, S. Boutet, J. Messinger, A. Zouni, N. K. Sauter, V. K. Yachandra, U. Bergmann, J. Yano Science 2013, 6131, 491–495, 10.1126/Science.1234273

916 Fast high-pressure freezing of protein crystals in their mother liquor A. Burkhardt, M. Warmer, S. Panneerselvam, A. Wagner, A. Zouni, C. Glöckner, R. Reimer, H. Hohenberg, A. Meents Acta Crystallographica Section F Structural Biology and Crystallization Communications Acta Cryst Sec F 2012, 4, 495–500, 10.1107/S1744309112009670

915 Room temperature femtosecond X-ray diffraction of photosystem II microcrystals J. Kern, R. Alonso-Mori, J. Hellmich, R. Tran, J. Hattne, H. Laksmono, C. Glockner, N. Echols, R. G. Sierra, J. Sellberg, B. Lassalle-Kaiser, R. J. Gildea, P. Glatzel, R. W. Grosse-Kunstleve, M. J. Latimer, T. A. McQueen, D. DiFiore, A. R. Fry, M. Messerschmidt, A. Miahnahri, D. W. Schafer, M. M. Seibert, D. Sokaras, T. C. Weng, P. H. Zwart, W. E. White, P. D. Adams, M. J. Bogan, S. Boutet, G. J. Williams, J. Messinger, N. K. Sauter, A. Zouni, U. Bergmann, J. Yano, V. K. Yachandra Proceedings of the National Academy of Sciences 2012, 25, 9721–9726, 10.1073/pnas.1204598109

914 Energy-dispersive X-ray emission spectroscopy using an X-ray free-electron laser in a shot-by-shot mode R. Alonso-Mori, J. Kern, R. J. Gildea, D. Sokaras, T. C. Weng, B. Lassalle-Kaiser, R. Tran, J. Hattne, H. Laksmono, J. Hellmich, C. Glockner, N. Echols, R. G. Sierra, D. W. Schafer, J. Sellberg, C. Kenney, R. Herbst, J. Pines, P. Hart, S. Herrmann, R. W. Grosse-Kunstleve, M. J. Latimer, A. R. Fry, M. M. Messerschmidt, A. Miahnahri, M. M. Seibert, P. H. Zwart, W. E. White, P. D. Adams, M. J. Bogan, S. Boutet, G. J. Williams, A. Zouni, J. Messinger, P. Glatzel, N. K. Sauter, V. K. Yachandra, J. Yano, U. Bergmann Proceedings of the National Academy of Sciences 2012, 47, 19103–19107, 10.1073/pnas.1211384109

912 Nanoflow electrospinning serial femtosecond crystallography R. G. Sierra, H. Laksmono, J. Kern, R. Tran, J. Hattne, R. Alonso-Mori, B. Lassalle-Kaiser, C. Glöckner, J. Hellmich, D. W. Schafer, N. Echols, R. J. Gildea, R. W. Grosse-Kunstleve, J. Sellberg, T. A. McQueen, A. R. Fry, M. M. Messerschmidt, A. Miahnahri, M. M. Seibert, C. Y. Hampton, D. Starodub, N. D. Loh, D. Sokaras, T. C. Weng, P. H. Zwart, P. Glatzel, D. Milathianaki, W. E. White, P. D. Adams, G. J. Williams, S. Boutet, A. Zouni, J. Messinger, N. K. Sauter, U. Bergmann, J. Yano, V. K. Yachandra, M. J. Bogan Acta Crystallographica Section D Biological Crystallography Acta Crystallographica Section D 2012, 11, 1584–1587, 10.1107/S0907444912038152

719 Structural Basis of Cyanobacterial Photosystem II Inhibition by the Herbicide Terbutryn M. Broser, C. Glöckner, A. Gabdulkhakov, A. Guskov, J. Buchta, J. Kern, F. Müh, H. Dau, W. Saenger, A. Zouni Journal of Biological Chemistry 2011, 18, 15964–15972, 10.1074/jbc.M110.215970

714 Light-induced quinone reduction in photosystem II F. Müh, C. Glöckner, J. Hellmich, A. Zouni Biochimica et Biophysica Acta (BBA) - Bioenergetics Biochimica et Biophysica Acta 2012, 1, 44–65, 10.1016/j.bbabio.2011.05.021

593 Polarised Raman measurements of β-carotene encapsulated in SWNTs K. Brose, N. Tschirner, A. Zouni, F. Müh, K. Yanagi, H. Kataura, C. Thomsen, J. Maultzsch physica status solidi (b) 2010, 11, 2871–2874, 10.1002/pssb.201000370

432 Crystal Structure of Monomeric Photosystem II from at 3.6-Å Resolution M. Broser, A. Gabdulkhakov, J. Kern, A. Guskov, F. Müh, W. Saenger, A. Zouni Journal of Biological Chemistry 2010, 34, 26255–26262, 10.1074/jbc.M110.127589

431 Recent Progress in the Crystallographic Studies of Photosystem II A. Guskov, A. Gabdulkhakov, M. Broser, C. Glöckner, J. Hellmich, J. Kern, J. Frank, F. Müh, W. Saenger, A. Zouni ChemPhysChem ChemPhysChem 2010, 6, 1160–1171, 10.1002/cphc.200900901

358 High-Field 2H-Mims-ENDOR Spectroscopy on PSII Single Crystals: Hydrogen Bonding of YD. S. Keßen, C. Teutloff, J. Kern, A. Zouni, R. Bittl ChemPhysChem ChemPhysChem 2010, 6, 1275–1282, 10.1002/cphc.200901019

344 Electronic structure of the tyrosine D radical and the water-splitting complex from pulsed ENDOR spectroscopy on photosystem II single crystals C. Teutloff, S. Pudollek, S. Keßen, M. Broser, A. Zouni, R. Bittl Physical Chemistry Chemical Physics 2009, 31, 6715– 10.1039/b908093g

286 The anomaly of the $\nu$ -resonance Raman band of bβ-carotene in solution and in photosystem I and II N. Tschirner, K. Brose, M. Schenderlein, A. Zouni, E. Schlodder, M. A. Mroginski, P. Hildebrandt, C. Thomsen physica status solidi (b) Physica Status Solidi B-Basic Solid State Physics 2009, 11, 2790–2793, 10.1002/pssb.200982299

252 Probing the Accessibility of the Mn4Ca Cluster in Photosystem II: Channels Calculation, Noble Gas Derivatization, and Cocrystallization with DMSO A. Gabdulkhakov, A. Guskov, M. Broser, J. Kern, F. Müh, W. Saenger, A. Zouni Structure Structure 2009, 9, 1223–1234, 10.1016/j.str.2009.07.010

251 Cyanobacterial photosystem II at 2.9-Å resolution and the role of quinones, lipids, channels and chloride A. Guskov, J. Kern, A. Gabdulkhakov, M. Broser, A. Zouni, W. Saenger Nature Structural & Molecular Biology Nature structural & molecular biology 2009, 3, 334–342, 10.1038/nsmb.1559

212 Polarised Raman measurements on the core complex of crystallised photosystem II K. Brose, A. Zouni, M. Broser, F. Müh, J. Maultzsch physica status solidi (b) Physica Status Solidi B-Basic Solid State Physics 2009, 11, 2813–2816, 10.1002/pssb.200982348